Featured Publications

  • Dahal L, Ghojoghnejad M, Vancoillie L, Ghosh D, Bhandari Y, Kim D, Ho FC, Tushar FI, Luo S, Lafata KJ, Abadi E, Samei E, Lo JY, Segars WP.
    XCAT 3.0: A comprehensive library of personalized digital twins derived from CT scans.
    Medical Image Analysis. 2025;103:103636. Epub 2025/05/03. [Foundation]
    https://doi.org/10.1016/j.media.2025.103636

  • Samei E.
    The future of in silico trials and digital twins in medicine.
    PNAS Nexus.2025;4(5):pgaf123 Epub 2025/04/18. [Foundation]
    https://doi.org/10.1093/pnasnexus/pgaf123

  • Wang AJ, Tushar FI, Harowicz MR, Tong BC, Lafata KJ, Tailor TD, Lo JY.
    Duke Lung Cancer Screening (DLCS) Dataset: A Reference Dataset of Annotated Low-dose Screening Thoracic CT.
    Radiology Artificial Intelligence.2025;e240248 Epub 2025/04/16. [Foundation]
    https://doi.org/10.1148/ryai.240248

  • Tushar FI, Vancoillie L, McCabe C, Kavuri A, Dahal L, Harrawood B, Fryling M, Zarei M, Sotoudeh-Paima S, et al.
    Virtual lung screening trial (VLST): An in silico study inspired by the national lung screening trial for lung cancer detection.
    Medical Image Analysis.2025;103:103576 Epub 2025/04/05. [Foundation]
    https://doi.org/10.1016/j.media.2025.103576

  • Modanwal G, Vellal A, Mazurowski MA.
    Normalization of breast MRIs using cycle-consistent generative adversarial networks.
    Comput Methods Programs Biomed. .2021;208:106225. Epub 2021/07/02. [Foundation]
    https://doi.org/10.1016/j.cmpb.2021.106225

  • Hoye J, Smith T, Abadi E, Solomon JB, Samei E.
    Correction for Systematic Bias in Radiomics Measurements Due to Variation in Imaging Protocols.
    Acad Radiol. .2021. Epub 2021/06/17. [Foundation]
    https://doi.org/10.1016/j.acra.2021.04.012

  • Swiecicki A, Konz N, Buda M, Mazurowski MA.
    A generative adversarial network-based abnormality detection using only normal images for model training with application to digital breast tomosynthesis.
    Sci Rep. .2021;11(1):10276. Epub 2021/05/15. PMC8119417. [Foundation]
    https://doi.org/10.1038/s41598-021-89626-1

  • Sharma S, Abadi E, Kapadia A, Segars WP, Samei E.
    A GPU-accelerated framework for rapid estimation of scanner-specific scatter in CT for virtual imaging trials.
    Phys Med Biol. .2021;66(7). Epub 2021/03/03. PMC8381286. [Foundation]
    https://doi.org/10.1088/1361-6560/abeb32

  • Fricks R, Abadi E, Ria F, Samei E.
    Classification of COVID-19 in chest radiographs: assessing the impact of imaging parameters using clinical and simulated images.
    SPIE Medical Imaging. .2021;11597. [Foundation]
    https://doi.org/10.1117/12.2582223

  • Jadick G, Abadi E, Harrawood B, Sharma S, Segars WP, Samei E.
    A framework to simulate CT images with tube current modulation.
    SPIE Medical Imaging. .2021;11595. [Foundation]
    https://doi.org/10.1117/12.2580983

  • Zarei M, Abadi E, Fricks R, Segars WP, Samei E.
    A probabilistic conditional adversarial neural network to reduce imaging variation in radiography.
    SPIE Medical Imaging. .2021;11595. [Foundation]
    https://doi.org/10.1117/12.2582336

  • Zarei M, Abadi E, Segars WP, Richards T, Samei E.
    Multi-factorial optimization of imaging parameters for quantifying coronary stenosis in cardiac CT.
    SPIE Medical Imaging. .2021;11595. [Foundation]
    https://doi.org/10.1117/12.2582311

  • Sauer T, Abadi E, Segars WP, Samei E.
    Optimization of CT angiography using physiologically-informed computational plaques, dynamic XCAT phantoms, and physics-based CT simulation.
    SPIE Medical Imaging. .2021;11595. [Foundation]
    https://doi.org/10.1117/12.2582293

  • Sugiura T, Tanaka R, Segars WP, Abadi E, Samei E.
    Correlation of respiratory changes in lung density on dynamic chest radiographs with changes in the CT value: a computational phantom study.
    SPIE Medical Imaging. .2021;11595. [Foundation]
    https://doi.org/10.1117/12.2579973

  • Abadi E, Jadick G, Hoffman E, Lynch D, Segars WP, Samei E.
    COPD quantifications via CT imaging: ascertaining the effects of acquisition protocol using virtual imaging trial.
    SPIE Medical Imaging. .2021;11595. [Foundation]
    https://doi.org/10.1117/12.2581965

  • Gann AM, Abadi E, Hoye J, Sauer T, Segars WP, Chalian H, Samei E.
    An analysis of radiomics features in lung lesions in COVID-19.
    SPIE Medical Imaging. .2021;11595. [Foundation]
    https://doi.org/10.1117/12.2582296

Related