Featured Publications

  • Sotoudeh-Paima S, Lynch DA, Humphries SM, Samei E, Abadi E.
    Precise lung density quantification using a physics-based CT harmonizer.
    Medical Physics. 2026;8(2). Epub 2026/03/23. [Foundation]
    https://doi.org/10.1148/ryct.250124

  • Dahal L, Ghojoghnejad M, Vancoillie L, Ghosh D, Bhandari Y, Kim D, Ho FC, Tushar FI, Luo S, Lafata KJ, Abadi E, Samei E, Lo JY, Segars WP.
    XCAT 3.0: A comprehensive library of personalized digital twins derived from CT scans.
    Medical Image Analysis. 2025;103:103636. Epub 2025/05/03. [Foundation]
    https://doi.org/10.1016/j.media.2025.103636

  • Samei E.
    The future of in silico trials and digital twins in medicine.
    PNAS Nexus.2025;4(5):pgaf123 Epub 2025/04/18. [Foundation]
    https://doi.org/10.1093/pnasnexus/pgaf123

  • Wang AJ, Tushar FI, Harowicz MR, Tong BC, Lafata KJ, Tailor TD, Lo JY.
    Duke Lung Cancer Screening (DLCS) Dataset: A Reference Dataset of Annotated Low-dose Screening Thoracic CT.
    Radiology Artificial Intelligence.2025;e240248 Epub 2025/04/16. [Foundation]
    https://doi.org/10.1148/ryai.240248

  • McCabe C, Harrawood B, Samei E, Abadi E.
    In silico modeling of a clinical photon‐counting CT system: Verification and validation.
    Medical Physics. 2025;1-14 Epub 2025/05/13. [Foundation]
    https://doi.org/10.1109/jbhi.2021.3063080

  • Sotoudeh-Paima S, Samei E, Abadi E.
    Reproducibility of Lung Density Quantification across Photon-counting and Conventional Energy-integrating CT: A Comparative Study.
    British Journal of Radiology. 2025;98(1175):1890-1898. Epub 2025/05/10. [Foundation]
    https://doi.org/10.1093/bjr/tqaf103

  • Taguchi K, Subramanian S, Faria AV, Segars WP.
    Volumetric soft tissue perfusion assessment on a region basis from x-ray angiography images: Motion compensation.
    Medical Physics. 2025;52(6):3785-3799. Epub 2025/04/21. [Foundation]
    https://doi.org/10.1002/mp.17870

  • McCabe C, Abadi E, Zarei M, Segars WP, Samei E.
    The potential of photon-counting CT for the improved precision of lung nodule radiomics.
    Phys Med Biol. 2025;70(3):10.1088/1361-6560/adaad2. Epub 2025/01/27. [Foundation]
    https://doi.org/10.1088/1361-6560/adaad2

  • Abadi E, Segars WP, Felice N, Sotoudeh-Paima S, Hoffman EA, Wang X, Wang W, Clark D, Ye S, Jadick G, Fryling M, Frush DP, Samei E.
    AAPM Truth-based CT (TrueCT) reconstruction grand challenge.
    Medical Physics.2025;52(4) Epub 2025/01/14. [Foundation]
    https://doi.org/10.1002/mp.17619

  • Zarei M, Sotoudeh-Paima S, McCabe C, Abadi E, Samei E.
    A Physics-based Deep Neural Network for Harmonization of CT Images.
    IEEE Trans Biomed Eng. 2024;71(12):3494-3504. Epub 2024/12/16. [Foundation]
    https://doi.org/10.1109/TBME.2024.3428399

  • Alsaihati N, Solomon J, McCrum E, Samei E.
    Development, validation, and application of a generic image-based noise addition method for simulating reduced dose computed tomography images.
    Medical Physics. 2024;52(1):171-187. Epub 2024/10/24. [Foundation]
    https://doi.org/10.1002/mp.17444

  • Davey M, Puelz C, Rossi S, Smith MA, Wells D, Sturgeon G, Segars WP, Vavalle JP, Peskin CS, Griffith B.
    Simulating Cardiac Fluid Dynamics in the Human Heart.
    Medical Physics. 2024;3(10):pgae392. Epub 2024/09/10. [Foundation]
    https://doi.org/10.1093/pnasnexus/pgae392

  • Rajagopal JR, Farhadi F, Saboury B, Sahbaee P, Negussie AH, Pritchard WF, Jones EC, Samei E.
    Multivariate signal-to-noise ratio as a metric for characterizing spectral computed tomography.
    Phys Med Biol. 2024;69(14). Epub 2024/07/08. [Foundation]
    https://doi.org/10.1088/1361-6560/ad5d4a

  • Jankowski, S, Rotzinger, D, Ria F, Pozzessere C.
    ChatGPT versus Radiology Institutional Websites: Comparative Analysis of Radiation Protection Information Provided to Patients.
    Radiology. 2024;311(3) Epub 2024/06/25. [Foundation]
    https://doi.org/10.1148/radiol.233465

  • Rajagopal RJ, Farhadi F, Solomon J, Saboury B, Sahbaee P, Negussie AH, Pritchard WF, Jones EC, Samei E.
    Development of a separability index for task specific characterization of spectral computed tomography.
    Phys Med. 2024:122:103382. Epub 2024/05/30. [Foundation]
    https://doi.org/10.1016/j.ejmp.2024.103382

  • Zarei M, Abadi E, Vancoillie L, Samei E.
    Protocol selection formalism for minimizing detectable differences in morphological radiomics features of lung lesions in repeated CT acquisitions.
    Journal of Medical Imaging. 2024;11(2)025501. Epub 2024/04/26.[Foundation]
    https://doi.org/10.1117/1.JMI.11.2.025501

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