Featured Publications

  • Dahal L, Ghojoghnejad M, Vancoillie L, Ghosh D, Bhandari Y, Kim D, Ho FC, Tushar FI, Luo S, Lafata KJ, Abadi E, Samei E, Lo JY, Segars WP.
    XCAT 3.0: A comprehensive library of personalized digital twins derived from CT scans.
    Medical Image Analysis. 2025;103:103636. Epub 2025/05/03. [Foundation]
    https://doi.org/10.1016/j.media.2025.103636

  • Samei E.
    The future of in silico trials and digital twins in medicine.
    PNAS Nexus.2025;4(5):pgaf123 Epub 2025/04/18. [Foundation]
    https://doi.org/10.1093/pnasnexus/pgaf123

  • Wang AJ, Tushar FI, Harowicz MR, Tong BC, Lafata KJ, Tailor TD, Lo JY.
    Duke Lung Cancer Screening (DLCS) Dataset: A Reference Dataset of Annotated Low-dose Screening Thoracic CT.
    Radiology Artificial Intelligence.2025;e240248 Epub 2025/04/16. [Foundation]
    https://doi.org/10.1148/ryai.240248

  • Tushar FI, Vancoillie L, McCabe C, Kavuri A, Dahal L, Harrawood B, Fryling M, Zarei M, Sotoudeh-Paima S, et al.
    Virtual lung screening trial (VLST): An in silico study inspired by the national lung screening trial for lung cancer detection.
    Medical Image Analysis.2025;103:103576 Epub 2025/04/05. [Foundation]
    https://doi.org/10.1016/j.media.2025.103576

  • Panta RK, Yin Z, Gronberg F, Bhattarai M, Abadi E, Segars P, Samei E.
    Iodine quantification performance with deep silicon-based Photon-Counting CT: A virtual imaging trial study.
    Physica Medica. 2025;135:105003. Epub 2025/06/16. [Foundation]
    https://doi.org/10.1016/j.ejmp.2025.105003

  • Salinas CS, Magudia K, Sangal A, Ren L, Segars WP.
    In-silico CT simulations of deep learning generated heterogeneous phantoms.
    Biomed Phys Eng Express. 2025;11(4). Epub 2021/07/10. [Foundation]
    https://doi.org/10.1088/2057-1976/ade9c9

  • McCabe C, Harrawood B, Samei E, Abadi E.
    In silico modeling of a clinical photon‐counting CT system: Verification and validation.
    Medical Physics. 2025;1-14 Epub 2025/05/13. [Foundation]
    https://doi.org/10.1109/jbhi.2021.3063080

  • Sotoudeh-Paima S, Samei E, Abadi E.
    Reproducibility of Lung Density Quantification across Photon-counting and Conventional Energy-integrating CT: A Comparative Study.
    British Journal of Radiology. 2025;, tqaf103 Epub 2025/05/10. [Foundation]
    https://doi.org/10.1093/bjr/tqaf103

  • Taguchi K, Subramanian S, Faria AV, Segars WP.
    Volumetric soft tissue perfusion assessment on a region basis from x-ray angiography images: Motion compensation.
    Medical Physics. 2025;52(6):3785-3799. Epub 2025/04/21. [Foundation]
    https://doi.org/10.1002/mp.17870

  • McCabe C, Abadi E, Zarei M, Segars WP, Samei E.
    The potential of photon-counting CT for the improved precision of lung nodule radiomics.
    Phys Med Biol. 2025;70(3) Epub 2025/01/15. [Foundation]
    https://doi.org/10.1088/1361-6560/adaad2

  • Abadi E, Segars WP, Felice N, Sotoudeh-Paima S, Hoffman EA, Wang X, Wang W, Clark D, Ye S, Jadick G, Fryling M, Frush DP, Samei E.
    AAPM Truth-based CT (TrueCT) reconstruction grand challenge.
    Medical Physics.2025;52(4) Epub 2025/01/14. [Foundation]
    https://doi.org/10.1002/mp.17619

  • Abadi E, McCabe C, Harrawood B, Sotoudeh-Paima S, Segars W, Samei E.
    Development and clinical applications of a virtual imaging framework for optimizing photon-counting CT.
    SPIE Medical Imaging. 2022;12031.
    https://doi.org/10.1117/12.2612079

  • Alsaihati N, Solomon J, Samei E.
    Development and validation of a generic image-based noise addition software for simulating reduced dose computed tomography images using synthetic projections.
    SPIE Medical Imaging. 2022;12031.
    https://doi.org/10.1117/12.2612666

  • Clark D, Abadi E, Felice N, Segars WP, Samei E, Badea C.
    Cardiac CT reconstruction for vendor-neutral virtual imaging trials.
    SPIE Medical Imaging. 2022;12031.
    https://doi.org/10.1117/12.2612950

  • Dahal L, Tushar FI, Abadi E, Fricks RB, Mazurowski M, Segars WP, Samei E, Lo J.
    Virtual versus reality: external validation of COVID-19 classifiers using XCAT phantoms for chest radiography.
    SPIE Medical Imaging. 2022;12031.

  • McCabe C, Zarei M, Segars WP, Samei E, Abadi E.
    Optimization of imaging parameters of an investigational photon-counting CT prototype for lung lesion radiomics.
    SPIE Medical Imaging. 2022;12033.
    https://doi.org/10.1117/12.2612973

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